PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.2343

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

HSF

Protein Properties

Length: 162aa MW: 18451.2 Da PI: 10.1292

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.2343	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	75	1.3e-23	93	151	2	60
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 Fl+k++e+++de +ke+isw eng++fvv+++ efa+++Lp +Fkh nf+SFvRQLn+Y evm.model.AsparagusV1_08.2343 93 FLMKTHEMVDDEGTKEVISWGENGTTFVVWKPVEFARDLLPVHFKHCNFSSFVRQLNTY 151 9*********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
ESWIQKILMS LLYLLSPTKQ RWEKVIKRIE ELRVQLQDAD PLTKVHQLKL STVLDEVAGK 60 IHGGYERGYV SSRSRSGNNN NSRVRANGGL APFLMKTHEM VDDEGTKEVI SWGENGTTFV 120 VWKPVEFARD LLPVHFKHCN FSSFVRQLNT YVRSPRLLAL G*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	8e-28	HSF family protein