PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.2393

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

G2-like

Protein Properties

Length: 182aa MW: 20874.6 Da PI: 8.6012

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.2393	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.9	1.5e-30	16	69	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt+eLH+rFveav+ LGG kAtPk+ilelm+vk L+++h+kSHLQ+YR+ evm.model.AsparagusV1_08.2393 16 PRLRWTEELHHRFVEAVRCLGGGRKATPKRILELMNVKELSISHIKSHLQMYRS 69 9****************************************************7 PP
2	Myb_DNA-binding	52.3	1.3e-16	17	68	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ ++v+av+ lGgg t+k+I + m+ k ++ ++ks++q+y+ evm.model.AsparagusV1_08.2393 17 RLRWTEELHHRFVEAVRCLGGGrkaTPKRILELMNvKELSISHIKSHLQMYR 68 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence
MSERRGVRKY NRSEEPRLRW TEELHHRFVE AVRCLGGGRK ATPKRILELM NVKELSISHI 60 KSHLQMYRSM SNNPANFHLF LSAKDLKKHK NLQPSTFGNS GACTSQSYCK NPQLSMIRFH 120 SEEGKREIQE RAVCDLTLCS SNYQETSDWG SSIEFDTFEE SSGCEDKVDS RKVNLDLTIS 180 I*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42660.1	7e-25	G2-like family protein