PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.2418

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 464aa MW: 51926 Da PI: 4.5128

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.2418	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	114.6	1e-35	21	155	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee....vikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkr 73 lppGfrFhPtd el+ ++L++k+++++ +++ ik++d+y++ePw+Lp+ +++eeke+yfFs+r+ +++++kr evm.model.AsparagusV1_08.2418 21 LPPGFRFHPTDRELIGFFLTRKIAASSSSVAAapssLIKDFDVYSTEPWNLPSdllLIQSEEKEMYFFSPRHPTSTSSKR 100 79********************9994443333337**********955777888999************* PP NAM 74 knratksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 nr++ g+W+ + d+++++ ++e++g ++ L+f +g+++k + dW+mhe++l evm.model.AsparagusV1_08.2418 101 VNRTAGCGFWHGSAGDTAIMV-GSEVIGYRTQLTFKtRGKEKKKINGDWIMHEFHL 155 *****************.9********9778999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MAVAMQPVVD DDLLAMLLQQ LPPGFRFHPT DRELIGFFLT RKIAASSSSV AAAPSSLIKD 60 FDVYSTEPWN LPSDLLLIQS EEKEMYFFSP RHPTSTSSKR VNRTAGCGFW HGSAGDTAIM 120 VGSEVIGYRT QLTFKTRGKE KKKINGDWIM HEFHLHSSSD DTVFDDMVLC RIYMKKVKKS 180 SQTNEQEDAI SVPAGEQEAV AEGHRVMKRK RADHHEMGTY GVVYNKSSDQ NASSLPKLPP 240 LPSFEESNVQ SDMCCVNVAV FDEKQKNEEE KEGRMLVKRM RVDENESLVA DCSEKRKSVP 300 ANTEPSSLLL LEDAHALVSY GDMEDISSLT LDVGSIVVSD SELSEAQRGL EQWLSEEPEQ 360 HKCWITVNNE RGNYEEENNA ESTIPLSPSN EGLQANLHLT NGLCATPPQE DDMYFDISDF 420 RFLLSPTDEG QSSSLLESNK ESEGFDLLTS DMTWDRLLQR GEK*

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MAVAMQPVVD DDLLAMLLQQ LPPGFRFHPT DRELIGFFLT RKIAASSSSV AAAPSSLIKD  60
FDVYSTEPWN LPSDLLLIQS EEKEMYFFSP RHPTSTSSKR VNRTAGCGFW HGSAGDTAIM  120
VGSEVIGYRT QLTFKTRGKE KKKINGDWIM HEFHLHSSSD DTVFDDMVLC RIYMKKVKKS  180
SQTNEQEDAI SVPAGEQEAV AEGHRVMKRK RADHHEMGTY GVVYNKSSDQ NASSLPKLPP  240
LPSFEESNVQ SDMCCVNVAV FDEKQKNEEE KEGRMLVKRM RVDENESLVA DCSEKRKSVP  300
ANTEPSSLLL LEDAHALVSY GDMEDISSLT LDVGSIVVSD SELSEAQRGL EQWLSEEPEQ  360
HKCWITVNNE RGNYEEENNA ESTIPLSPSN EGLQANLHLT NGLCATPPQE DDMYFDISDF  420
RFLLSPTDEG QSSSLLESNK ESEGFDLLTS DMTWDRLLQR GEK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	9e-32	NAC family protein