PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.2722
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family FAR1
Protein Properties Length: 440aa    MW: 50535.3 Da    PI: 7.612
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.2722genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR188.41e-2770158289
                           FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtk 80 
                                    fY +YA+++GFsvr+sks++s+++++i++r+fvCskeg++ ++++  + k++r+r++ r gC+a+++v +++ g+w+vtk
  evm.model.AsparagusV1_08.2722  70 FYMAYASRIGFSVRISKSRRSRNDESIIMRRFVCSKEGYHMKKENFdDGKKKRRRPTIREGCNAMIEVIQKYYGRWVVTK 149
                                    9*************************************9988777657889999************************** PP

                           FAR1  81 leleHnHel 89 
                                    l++eHnH +
  evm.model.AsparagusV1_08.2722 150 LVTEHNHIV 158
                                    *******76 PP

2FAR182.19.6e-26192281290
                           FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtk 80 
                                    fY +YA+++GF+vr++ s++s+r++++++r+fvC+keg++  e+++ ++k++r+r+ tr gCka+++v k++ ++w v+k
  evm.model.AsparagusV1_08.2722 192 FYYAYASRIGFDVRIRLSRRSTRDESFVMRRFVCTKEGYAPLEENSdESKKKRNRTPTREGCKAMFEVMKKDYDRWIVSK 271
                                    9**************************************9887777467888999************************* PP

                           FAR1  81 leleHnHela 90 
                                    l+ eH+H+la
  evm.model.AsparagusV1_08.2722 272 LVMEHTHDLA 281
                                    *******996 PP

Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    
MESTSSDDEE SLRDNNVDLN DDNLEHHLTL DVSNHLAESD NIFSSHQQFS ENPEPFVGME  60
FESEEAAKLF YMAYASRIGF SVRISKSRRS RNDESIIMRR FVCSKEGYHM KKENFDDGKK  120
KRRRPTIREG CNAMIEVIQK YYGRWVVTKL VTEHNHIVAA PSRVRYIAPE EYADMEPFLG  180
MEFPSHEAAQ TFYYAYASRI GFDVRIRLSR RSTRDESFVM RRFVCTKEGY APLEENSDES  240
KKKRNRTPTR EGCKAMFEVM KKDYDRWIVS KLVMEHTHDL AIAPSKVHYI QSQTEVVVLA  300
KSGTVNREKP VALANSGPQH VYLCSQKVYG WRYKEMLCVE LLMNPFSVFC QPPNRGYHYG  360
CPSGPVRAVQ KALPGPEPRP DQFWAEHWAG LRMATGLGWA VTHTEPAYSG SGLIGRLAYE  420
LDMDLFLKPM SELKPGSQT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119124KKKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.12e-36FAR1 family protein