PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.2765
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 106aa    MW: 12313 Da    PI: 8.4751
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.2765genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.000372952123
                                   EEETTTTEEESSHHHHHHHHHH.T CS
                        zf-C2H2  1 ykCpdCgksFsrksnLkrHirt.H 23
                                   y C++Cg + s ks+ ++H  t H
  evm.model.AsparagusV1_08.2765 29 YYCEYCGICRSKKSLIRSHVLTyH 52
                                   89*****************99988 PP
2zf-C2H223.61.3e-077698123
                                   EEETTTTEEESSHHHHHHHHHHT CS
                        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                                   y+C+ C+ sF+ + +Lk+H++ H
  evm.model.AsparagusV1_08.2765 76 YTCKECDASFRKPAYLKQHMQGH 98
                                   9*******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MTSATVMSET DHEMGEEIKK PIFRDIRRYY CEYCGICRSK KSLIRSHVLT YHKDQIKQAE  60
ADDNNSETNK GKKVWYTCKE CDASFRKPAY LKQHMQGHSL EVIGF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72050.21e-21C2H2 family protein