PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.2870
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ARR-B
Protein Properties Length: 307aa    MW: 34248.1 Da    PI: 8.3781
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.2870genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.62.8e-28168221155
                        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                    kpr++W+ eLH++Fv+av+qL G+ekA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl
  evm.model.AsparagusV1_08.2870 168 KPRVVWSVELHQQFVSAVSQL-GIEKAVPKRILELMNVPGLTRENVASHLQKFRL 221
                                    79*******************.********************************8 PP
2Myb_DNA-binding40.46.7e-13170220148
                                    TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                    r  W+ e+++++v av qlG +   +k+I + m+  g+t++++ s++qk++
  evm.model.AsparagusV1_08.2870 170 RVVWSVELHQQFVSAVSQLGIEkaVPKRILELMNvPGLTRENVASHLQKFR 220
                                    678**********************************************97 PP
3Response_reg62.12.9e-2129318109
                                    HHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
                   Response_reg  18 lekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                                    l++ +y +v+++ +++ al ll+ek+  +D+++ D+ mp+mdG++ll+     e++lp+i+++a g  +++ + +k Ga 
  evm.model.AsparagusV1_08.2870   2 LQRCRY-RVTTCCQATVALSLLREKRcgFDVVISDVHMPDMDGFKLLELVGL-EMDLPVIMMSADGGTNTVMRGIKHGAC 79 
                                    677889.****************************************87754.558************************ PP

                                    EEEESS--HHHHHH CS
                   Response_reg  96 dflsKpfdpeelvk 109
                                    d+l Kp+ +eel +
  evm.model.AsparagusV1_08.2870  80 DYLIKPVRIEELKN 93 
                                    ***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MLQRCRYRVT TCCQATVALS LLREKRCGFD VVISDVHMPD MDGFKLLELV GLEMDLPVIM  60
MSADGGTNTV MRGIKHGACD YLIKPVRIEE LKNIWQHVIR KKQNETKEYS GSMDDTHRNR  120
RVSDDAEYAS SVHDGADVSW RSNKKKRDTK EDENSGELDH EDSSSSKKPR VVWSVELHQQ  180
FVSAVSQLGI EKAVPKRILE LMNVPGLTRE NVASHLQKFR LYLKRISGVA QHQNGFPNSL  240
CGPIEPNTKV GSMGRLDFQA LAASGQIPSQ TLAALHAELL GHPSNSLVLP SMNSPLLQSR  300
QEPKSY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.11e-113ARR-B family protein