PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.29
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HD-ZIP
Protein Properties Length: 225aa    MW: 26396.6 Da    PI: 5.1266
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.29genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.84.4e-193285356
                                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                     Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                                 k+++f++eq++ Le +Fe + ++  +++ +LAk+lgL  rqV +WFqN+Ra++k
  evm.model.AsparagusV1_08.29 32 KKRRFSEEQVKSLELMFETQTKLEPRKKLQLAKELGLHPRQVAIWFQNKRARWK 85
                                 5679*************************************************9 PP
2HD-ZIP_I/II121.15.6e-3932123293
                  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLeke 83 
                                  kkrr+s+eqvk+LE +Fe+++kLep++K +la+eLgl+prqva+WFqn+RAR+k+kqlE++y+aL++ ydal ++ e+L++e
  evm.model.AsparagusV1_08.29  32 KKRRFSEEQVKSLELMFETQTKLEPRKKLQLAKELGLHPRQVAIWFQNKRARWKSKQLERQYAALRADYDALLSNFESLKHE 113
                                  9********************************************************************************* PP

                  HD-ZIP_I/II  84 veeLreelke 93 
                                  ++ L+++l++
  evm.model.AsparagusV1_08.29 114 KQLLAKQLQK 123
                                  *******987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MVESEDYSAT EEADGFMWMD PLSTKKGNAN DKKRRFSEEQ VKSLELMFET QTKLEPRKKL  60
QLAKELGLHP RQVAIWFQNK RARWKSKQLE RQYAALRADY DALLSNFESL KHEKQLLAKQ  120
LQKLAELLEK PMEERGNESD QEKADQRPNL MLTEKTEMRL MSSDDDEENR HTRCSEKEKD  180
FFSGPPTGGS LVPSEQQFCF HQPSWPTDQA CANSQWWEFW PMNE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.11e-32HD-ZIP family protein