PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.2954
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 252aa    MW: 29094.8 Da    PI: 9.9656
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.2954genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.45.7e-531042331128
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr 76 
                                    lppGfrFhP+deelv++yL+kk++g+k    + +  ++ +vd++k+ePwdLp+ +  + kewyf+s rd+kyatg+r+nr
  evm.model.AsparagusV1_08.2954 104 LPPGFRFHPRDEELVCDYLTKKISGDKsgslFGC-PTMIDVDLNKCEPWDLPEIACVGGKEWYFYSLRDRKYATGQRTNR 182
                                    79***********************996554333.358999***********7666689********************* PP

                            NAM  77 atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    at sgyWkatgkd++v++ +g lvg++ktLvfy+grapkg+ktdWvmhe+r+
  evm.model.AsparagusV1_08.2954 183 ATVSGYWKATGKDRHVTR-RGVLVGMRKTLVFYRGRAPKGRKTDWVMHEFRM 233
                                    *****************9.99*****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MTMLWPMNGT VISWFQLRSG LISYRSRPTY LMQTLWLFAD LGLTDDPLLQ HELGGCWPYV  60
HVSSMPSKQR HLTFLVLSFI DLSRSLVHIH LIRMSYLNMM EARLPPGFRF HPRDEELVCD  120
YLTKKISGDK SGSLFGCPTM IDVDLNKCEP WDLPEIACVG GKEWYFYSLR DRKYATGQRT  180
NRATVSGYWK ATGKDRHVTR RGVLVGMRKT LVFYRGRAPK GRKTDWVMHE FRMEVSDDKS  240
KFSVKLNVGG L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12977.12e-72NAC family protein