PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.2989
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 187aa    MW: 21015.5 Da    PI: 8.4954
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.2989genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.81.7e-12250455
                                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                            HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                                   +h ++Er+RR+++N+ +  Lr+l P     + k+ + a+i   A+e+Ik+Lq
  evm.model.AsparagusV1_08.2989  2 SHIAVERNRRRQMNEHLKVLRSLTPCF---YIKRGDQASIIGGAIEFIKELQ 50
                                   89************************9...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MSHIAVERNR RRQMNEHLKV LRSLTPCFYI KRGDQASIIG GAIEFIKELQ QVLQSLEAKK  60
QRKSLSPTPS PKPQLLPLSL PQPVDSPHEN SKELSVSCNT PIADVEAKIS GSNVILRTVS  120
KRKHGQVVKI IDVLEKLSFE ILHLNISSME TTVLYSFVIK IGLECQLSLE ELVFEVQQTF  180
EEVIVF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.13e-79bHLH family protein