PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.299
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 172aa    MW: 18705.5 Da    PI: 10.0086
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.299genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH130.00019151171424
                                   HHHHHHHHHHHHHHHHHHHHH CS
                           HLH   4 ahnerErrRRdriNsafeeLr 24 
                                    hn  E rRRdriN+++  L+
  evm.model.AsparagusV1_08.299 151 VHNLSEWRRRDRINEKMRALQ 171
                                   6***************98885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MPPPKSQTTH LGNFSHFSRP IRGDVGESSS IKTVGSSTCG SNQVPNQGDV SNNLSRCVFE  60
KGSKGKGPMI SVQGVHANTF DTTMTSSSGG PGCSFGRTTG KQSMSNQNNK RKGRDAEESE  120
CHSEEAEYES IEAKKHTQQS TSTRKSRAAE VHNLSEWRRR DRINEKMRAL Q*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.14e-11bHLH family protein