PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.3092
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family AP2
Protein Properties Length: 106aa    MW: 11692.3 Da    PI: 8.0689
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.3092genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.23.6e-125695145
                            AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAaka 45
                                   s+y GV++++++grW+++I+d      + k ++lg f+ta  Aa++
  evm.model.AsparagusV1_08.3092 56 SQYIGVTFYRRTGRWESHIWD------CgKLVYLGGFDTAHVAARL 95
                                   789******************......55**********9999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MVFDLNLSSP EDLSIVSGTL NSSYSFSFLD LSLMGCDLRQ QQAMKRSRHG PRSGSSQYIG  60
VTFYRRTGRW ESHIWDCGKL VYLGGFDTAH VAARLVLCPL IVTDG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60120.12e-24AP2 family protein