PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.3116
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 180aa    MW: 20285.3 Da    PI: 10.1001
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.3116genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.52e-1275166198
                                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS
                             B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 
                                    f ++ ++  v+    lv+p+ f +     +++s++++l+  +g++W+ k+  +++     + +GW++F+ +n+Lk+gD +
  evm.model.AsparagusV1_08.3116  75 FTSIVVKTQVTDPFSLVIPRCFRRFL---PNSSVDVVLYC-RGKRWKAKY--SGQLTLKRINTGWRDFALDNKLKVGDGC 148
                                    5566777888888999***9997544...34788999877.9********..6666556689****************** PP

                                    EEEE-SSSEE..EEEEE- CS
                             B3  81 vFkldgrsefelvvkvfr 98 
                                    v +l++ ++ e++v++++
  evm.model.AsparagusV1_08.3116 149 VYELMDCNKLEFRVQILQ 166
                                    ***997799999999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MKNPSRCGSS TPALCQVPLQ DQNFFTQSSC DFSADAKNER SRNSSKTPES KMRRAPLRTS  60
CKRDRIAPLS GNPYFTSIVV KTQVTDPFSL VIPRCFRRFL PNSSVDVVLY CRGKRWKAKY  120
SGQLTLKRIN TGWRDFALDN KLKVGDGCVY ELMDCNKLEF RVQILQGEVP TMSTQDLVG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.12e-07B3 family protein