PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.3249
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 178aa    MW: 20030.2 Da    PI: 5.2672
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.3249genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding315.9e-1025502046
                                   TTT-HHHHHHHHTTTS-HHHHHHHHHH CS
                Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqk 46
                                   G+  W++Ia++++ gRt++++k++w++
  evm.model.AsparagusV1_08.3249 25 GKQLWSKIAQHLP-GRTDNEIKNYWRT 50
                                   7778*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MSDEATSPSK NNCSFSSFIR DLEIGKQLWS KIAQHLPGRT DNEIKNYWRT RVQKHAKQLK  60
CDVNSKQFKD VMYHLWIPRL LERIQTNSTV PEPVNGQHEQ SPGCSSSDSV VTRSSSPLTS  120
DCFPVEGFNV VGGASTGGDQ IHEAEYRSLA GYSDRGLLDF EEWDMGGNLW NVEDIWF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.12e-32MYB family protein