PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.3278

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

Dof

Protein Properties

Length: 602aa MW: 65906.9 Da PI: 6.9668

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.3278	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.3	3.5e-38	109	168	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s ntkfCyynny+++qPr+fC++C+ryWt+GG++rnvPvG+g+rk k+s evm.model.AsparagusV1_08.3278 109 PDKILPCPRCNSLNTKFCYYNNYNVNQPRHFCRNCQRYWTAGGTMRNVPVGAGKRKTKHS 168 7899*****************************************************986 PP
2	Myb_DNA-binding	44.5	3.5e-14	497	542	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W Ed l ++v q+G+ +W++Ia++ + gR++k+c++rw++ evm.model.AsparagusV1_08.3278 497 RGHWRRSEDAELRELVSQHGPQNWNLIAEKQQ-GRSGKSCRLRWFNQ 542 899***************************.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MAADVGEPHI EISDGAAPLT DSDPQPDPIR DPKGICRGIT NEEVKDRAAD VSEALDQDFE 60 VAGSSGLNSG SQSDHHVSIH TEEALTDSKH NHDLSESDSS GKNKALKKPD KILPCPRCNS 120 LNTKFCYYNN YNVNQPRHFC RNCQRYWTAG GTMRNVPVGA GKRKTKHSLK QQNHSGGASV 180 SIKPLMGNEV VMKFGPETPL CKPAASVEMA FVSVGEKGKE PSPSSSITPS CSENDFPKLE 240 AHKDQNCPPV CGSGLRPLHP LQGFPGPPWP YFLGPEWNNI AAMAASNCSF ENGSPNPLPW 300 TPPMIFAAPA LCTSTVPFPF MPPSFWPCTT SWPNQAWNVP WSGSINGLSP FSSAITNNMS 360 SDNDPPTLGK HSRDGSLEGE NKTERKSLWI PKTLRIDDPE EAAKSSIWST LGIKPDESIK 420 RGSLFRACCR ASLCCHVVVG DELASLIDHL GPVSETSSQN SIRILFRTCI SGQIANAYCE 480 LGNWIQNENE QSKFCSRGHW RRSEDAELRE LVSQHGPQNW NLIAEKQQGR SGKSCRLRWF 540 NQLDPSINRS ALTEEEESRL LAAQKADGSK CAIIASVFPG STDKGVKNHW HVIMARKQRE 600 E*

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MAADVGEPHI EISDGAAPLT DSDPQPDPIR DPKGICRGIT NEEVKDRAAD VSEALDQDFE  60
VAGSSGLNSG SQSDHHVSIH TEEALTDSKH NHDLSESDSS GKNKALKKPD KILPCPRCNS  120
LNTKFCYYNN YNVNQPRHFC RNCQRYWTAG GTMRNVPVGA GKRKTKHSLK QQNHSGGASV  180
SIKPLMGNEV VMKFGPETPL CKPAASVEMA FVSVGEKGKE PSPSSSITPS CSENDFPKLE  240
AHKDQNCPPV CGSGLRPLHP LQGFPGPPWP YFLGPEWNNI AAMAASNCSF ENGSPNPLPW  300
TPPMIFAAPA LCTSTVPFPF MPPSFWPCTT SWPNQAWNVP WSGSINGLSP FSSAITNNMS  360
SDNDPPTLGK HSRDGSLEGE NKTERKSLWI PKTLRIDDPE EAAKSSIWST LGIKPDESIK  420
RGSLFRACCR ASLCCHVVVG DELASLIDHL GPVSETSSQN SIRILFRTCI SGQIANAYCE  480
LGNWIQNENE QSKFCSRGHW RRSEDAELRE LVSQHGPQNW NLIAEKQQGR SGKSCRLRWF  540
NQLDPSINRS ALTEEEESRL LAAQKADGSK CAIIASVFPG STDKGVKNHW HVIMARKQRE  600
E*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	2e-58	Dof family protein