PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.3285
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 275aa    MW: 31074 Da    PI: 9.154
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.3285genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.12.9e-52161431128
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratks 80 
                                    lppGfrFhPtdeelvv+yL++k++ ++l++  +i+evd+yk++Pw+Lp+k+  ++kewyfF++rd+ky++g+r+nra+ +
  evm.model.AsparagusV1_08.3285  16 LPPGFRFHPTDEELVVHYLCRKAAYQRLPV-PIIAEVDLYKHDPWNLPEKALFGQKEWYFFTPRDRKYPNGSRPNRAAGK 94 
                                    79****************************.88***************8888899************************* PP

                            NAM  81 gyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    gyWkatg dk+v    +++  g+kk Lvfy+g+ap+g ktdW+mheyrl
  evm.model.AsparagusV1_08.3285  95 GYWKATGADKPVSPPgSKKPLGIKKALVFYSGKAPRGIKTDWIMHEYRL 143
                                    ************99866777***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MGGGRRSRDA EAELNLPPGF RFHPTDEELV VHYLCRKAAY QRLPVPIIAE VDLYKHDPWN  60
LPEKALFGQK EWYFFTPRDR KYPNGSRPNR AAGKGYWKAT GADKPVSPPG SKKPLGIKKA  120
LVFYSGKAPR GIKTDWIMHE YRLADANRAP NRKDSIRLDD WVLCRLYNKK NNWAKTQQSS  180
SFDDAMGSLM DAADDARSDS DNVSPQIYQP QVPQVGLKKE DNDWFMDLNL DDLQTSFGDF  240
GSSATGFGTS NQNYLLEALG SPMMKMNQNN MLPF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.14e-88NAC family protein