PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.330

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

HD-ZIP

Protein Properties

Length: 159aa MW: 17739.2 Da PI: 9.9132

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.330	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	40.1	6.2e-13	50	78	28	56
HHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 28 eereeLAkklgLterqVkvWFqNrRakek 56 ++++ LAk+l+L rqV vWFqNrRa+ k evm.model.AsparagusV1_08.330 50 KQKQALAKQLNLRPRQVEVWFQNRRARTK 78 799************************98 PP
2	HD-ZIP_I/II	90.4	2.2e-29	49	114	26	92
HD-ZIP_I/II 26 perKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ++K++la++L+l+prqv+vWFqnrRARtk+kq+E+++e+Lkr++++l+een+rL+kev eLr +lk evm.model.AsparagusV1_08.330 49 GKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVECEYLKRWCQKLAEENKRLQKEVGELR-ALK 114 589***********************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence
MAAESEDLRL SLSLSSSQSF FPLKLTLFPS SNGPSKARFV NGEVEEDAGK QKQALAKQLN 60 LRPRQVEVWF QNRRARTKLK QTEVECEYLK RWCQKLAEEN KRLQKEVGEL RALKSVSPRL 120 QTNAAPPTTL SMCPSCESTT PSAPALNPWS SYFFTGAS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	73	81	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44910.1	7e-44	HD-ZIP family protein