PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.3340
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 248aa    MW: 27713.6 Da    PI: 4.2535
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.3340genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.19.4e-10861102045
                                    S-EEEEEE-STT---EEEEEE-SSST CS
                           WRKY  20 fprsYYrCtsagCpvkkkversaedp 45 
                                      rsYYrCt+ +C++kk+v++ ++ p
  evm.model.AsparagusV1_08.3340  86 RKRSYYRCTYDDCKAKKQVQQIKN-P 110
                                    569*****************9873.3 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MEHSAVQELT KAKILMAQFW LLNGDATDTV RELSEGIMRA VEASLSLLNP SQKIAGSPKE  60
SEDLDPRPDK GGKRLRVENP NPREQRKRSY YRCTYDDCKA KKQVQQIKNP TYPPQYEVIS  120
SNMEHSCNSR ARCSSPQLSA ESEFTVIDFG SNVDTDQSID FGSDAPSPVL KEKEKDEEDQ  180
SFDTLTTDSY GTSSIDDGFG LVEPLSPAGQ FYGFDALACD YGTEENFDSM VPFPCLYEDL  240
WESRQLV*