PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.3341
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 206aa    MW: 23209.2 Da    PI: 4.7797
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.3341genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY24.84.4e-08841251958
                                    SS-EEEEEE-ST.T---EEEEEE-S.SSTTEEEEEEES--SS CS
                           WRKY  19 efprsYYrCtsa.gCpvkkkversa.edpkvveitYegeHnh 58 
                                    +  r YYrCt+a  C++kk+v +++ + p   e+++ +eH +
  evm.model.AsparagusV1_08.3341  84 PRKRCYYRCTYApYCEAKKQVRQKNsSYPPDYEVIFINEHSC 125
                                    66799******99********766515577899999999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MELAAKELTK AQQLMAQLWI VNKDCSESAR EFSVGVMRAI EAALILLNSV EKNADSVKEP  60
RKIDPKSDKK AKRLRIEDPN PNEPRKRCYY RCTYAPYCEA KKQVRQKNSS YPPDYEVIFI  120
NEHSCIAQMD SSLQRSTELE SKTINSDLDP NGPNPISKEK ENDAESSGSL GTTDEIDWMP  180
PLSPIDLHGI DIFAYDDPLM SCCNF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66560.14e-06WRKY family protein