PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.3407
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 184aa    MW: 20400.9 Da    PI: 7.0273
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.3407genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH345.3e-115294855
                                   HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                            HLH  8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                                   + r+RR+ri ++f  L++l+P        K++ +++Le+A++Y+k+L+
  evm.model.AsparagusV1_08.3407 52 AARQRRHRISDRFRVLKSLVPGG-----SKMDTVSMLEEAINYVKYLK 94
                                   569******************95.....5*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MESCQQSPWL LTEVNNSSSS TKTLTQNPKE RRSSAKRPAS SMKLSTDPQS VAARQRRHRI  60
SDRFRVLKSL VPGGSKMDTV SMLEEAINYV KYLKTQIWLH QAAEALIVNP NHDHHQEPTN  120
LSFGANCFGD VGTSVVDTNA SVCTSEEMLS YSLPPPPPSL VPFPYCSYEG GEEMNPNFSV  180
NYY*