PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.3428
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 243aa    MW: 26490.3 Da    PI: 7.4381
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.3428genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.001491111323
                                    ETTTTEEESSHHHHHHHHHHT CS
                        zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                                    C  Cgks     nL+ H r H
  evm.model.AsparagusV1_08.3428  91 CDVCGKSSGADQNLQIHRRGH 111
                                    ******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MRDSESFEIM RESSAYVGSE LFRSSQLIKD GLDEVALTEK RKRFTEYVMN MNLPMDQCLT  60
AIGAIGTNRS DAEVHRALAG DASSRRRRVA CDVCGKSSGA DQNLQIHRRG HNIHVEARRP  120
AEGGGGRPRA RRGCTSGPAE GCVIMIRRGS GGPDGDQEAN CRKHGEERRW DAERRKESYA  180
IHRETCEATV GEEESDGGYG SGRNVMGGVN FGIRANAVNT ELLFPSLWGR VSSATGDKNA  240
EE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66730.12e-10C2H2 family protein