PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.3506
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WOX
Protein Properties Length: 213aa    MW: 23779.5 Da    PI: 4.9003
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.3506genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.41.3e-191877357
                                   --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                       Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                                   +R+++tk+q+ +Le+l+++  r+ps+e++++++++l      + ++V++WFqN++a++++
  evm.model.AsparagusV1_08.3506 18 SRWNPTKDQIAILESLYRQgLRTPSTEQIQQITARLrefgTTEGKNVFYWFQNHKARQRQ 77
                                   7*****************99*******************99999**************97 PP
2Wus_type_Homeobox111.93.5e-361778364
              Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                                    +RW+Pt++Qi iLe+ly++GlrtP++e+iq+ita+L+e+G  e+kNVfyWFQN+kaR+rq+
  evm.model.AsparagusV1_08.3506 17 GSRWNPTKDQIAILESLYRQGLRTPSTEQIQQITARLREFGTTEGKNVFYWFQNHKARQRQR 78
                                   68***********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MEPNSSSSSA SASAASGSRW NPTKDQIAIL ESLYRQGLRT PSTEQIQQIT ARLREFGTTE  60
GKNVFYWFQN HKARQRQRMK QESYYILKTS LIIVVCGPYC LPVTQGGAHV GLYPNMFMSR  120
PVPVSPIEQN QLQRINEQRL ANENNGNYTN GDDIETLQLF PLHPTGILEA HERSECPLIA  180
SASTVEPDQG VEEEDEGSEN NNVPPLMFNF FG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.13e-32WOX family protein