PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.3570
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 233aa    MW: 26568.4 Da    PI: 11.8672
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.3570genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.81.6e-1585129347
                                    SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
                Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                    +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
  evm.model.AsparagusV1_08.3570  85 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 129
                                    8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MGEGGGRAPW QVRQRRHLSL PRPRRRRGPY RSGPDTVPWL QLVVVHVGLG ERVRWDEAIL  60
LRRREEIRRQ AXXXXSDQER KKGVPWTEEE HKLFLMGLKK YGKGDWRNIS RNFVVTRTPT  120
QVASHAQKYF IRLNSGGKDK RRASIHDITT VNLPDGSPPS PSQSSSAVAR GRSDQFSMAV  180
DSEQHREPAA GFSPLKHGNL PYRQXXXXXX XAQTPHRSTL RDSMVAHRAM LI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.15e-47MYB_related family protein