PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.3586
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GRAS
Protein Properties Length: 338aa    MW: 36117.1 Da    PI: 8.0687
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.3586genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS234.93.4e-72263222296
                           GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaal 81 
                                    ++lLle A+a+s+++le a a La l+   +p+gdp qRla ++  AL ar+++     +++l+p ++ e  s e+ +a 
  evm.model.AsparagusV1_08.3586  26 KQLLLETATAISESNLEVAAANLAALKRAGNPRGDPDQRLALMMISALIARINS---PPSATLTPPAS-ELCSLEHQTAI 101
                                    689**************************************************9...22223333333.234999999** PP

                           GRAS  82 klfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesg..... 153
                                    ++++++sPi+k++h++aN aIl+a+  + ++Hi+Dfd+sqG+Q+++L++a ++R+   + +  + iT+v +p+       
  evm.model.AsparagusV1_08.3586 102 QMLYDASPIFKLGHVAANFAILDAARDHPKIHIVDFDLSQGVQYASLINAVSERSrhrSLTLLVNITAVCDPTMPyntps 181
                                    *****************************************************99543335589*******987788898 PP

                           GRAS 154 skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvks 233
                                      ++l+ +g+++  +A+++gvp++f+v + +r ++le  +L ++ gE+laV l+++l r+ des+s +++rd++L+ vks
  evm.model.AsparagusV1_08.3586 182 TVNNLKIIGDKIVTLASRFGVPVRFSV-LNRRASELERASLGCEAGECLAVYLSFALSRIADESASPANPRDQLLRRVKS 260
                                    999***********************9.599************************************************* PP

                           GRAS 234 lsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                                    l +++v +veqe++ n+++F++rf ea+ +y +++dsl+a+++r+++ r  +Er+ lgr+++n
  evm.model.AsparagusV1_08.3586 261 LGADIVKLVEQEMNANTAPFATRFGEACGHYGSVLDSLDATMSRDDRGRFRIERA-LGRKASN 322
                                    ******************************************************9.9999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MDGQSSERPV SSTSASCSPN PPASSKQLLL ETATAISESN LEVAAANLAA LKRAGNPRGD  60
PDQRLALMMI SALIARINSP PSATLTPPAS ELCSLEHQTA IQMLYDASPI FKLGHVAANF  120
AILDAARDHP KIHIVDFDLS QGVQYASLIN AVSERSRHRS LTLLVNITAV CDPTMPYNTP  180
STVNNLKIIG DKIVTLASRF GVPVRFSVLN RRASELERAS LGCEAGECLA VYLSFALSRI  240
ADESASPANP RDQLLRRVKS LGADIVKLVE QEMNANTAPF ATRFGEACGH YGSVLDSLDA  300
TMSRDDRGRF RIERALGRKA SNSEKGHTFV LKASCSG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.12e-57GRAS family protein