PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.3613
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 175aa    MW: 19872 Da    PI: 4.9251
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.3613genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.51.5e-083262246
                                   T-HHHHHHHHTTTS-HHHHHHHHHH CS
                Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqk 46
                                   ++W+ Ia+ ++ gRt+++++++w++
  evm.model.AsparagusV1_08.3613  3 NRWSIIAAQLP-GRTDNDIRNYWNT 26
                                   45*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MNNRWSIIAA QLPGRTDNDI RNYWNTRLKK KLLGPPLKET SRFSSQQPKP NSQTLTLNST  60
ALERMQLHYF LFQGINNINT FSFYNNPALW SKLHPLGATN NDSLIPIKNT ENEPSHNQPA  120
VTAGSKDQDS CETSSNFNLM QAELNDLFYA FDEEAISSSS WDLVFQDYET GYDL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.17e-19MYB family protein