PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.3614
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 227aa    MW: 25160.6 Da    PI: 7.9421
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.3614genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.65.3e-0977122654
                                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                            HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                      rE+ RRd++N++f eL ++l +    + +K +K++iL  A + +++L
  evm.model.AsparagusV1_08.3614  77 AFREKLRRDKLNDRFTELCSILDPG---RPPKADKVSILGDASRRLNHL 122
                                    569*********************8...88************9999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MGSFQNNSGG GWLFDYGICD DAAASDLIWA PQIIDDPMVS STMLGFEVPC KEGSVSEKAC  60
SRKRNHVESL AVPGTKAFRE KLRRDKLNDR FTELCSILDP GRPPKADKVS ILGDASRRLN  120
HLRGEAEKIK ESNKALQDNI KSLKEEKLEL RDEKVRLKAE KERIEQMLKA ANTAPTFIPY  180
PPASNAAFAS YKTVAYPSYV PVGTWQWLPT AELDTSQDHV LRPPVA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.14e-50bHLH family protein