PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.404

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

HSF

Protein Properties

Length: 137aa MW: 15664.3 Da PI: 9.5499

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.404	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.8	2.7e-36	20	111	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEE CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFk 82 Fl+k+y++++d++++++isw+++g++f+v+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+k+ ++ weF+ evm.model.AsparagusV1_08.404 20 FLSKTYQLVDDPSVDDVISWNDDGSAFIVWKPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFS 91 9***************************************************************99......... PP ESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 83 hksFkkgkkellekikrkks 102 ++sF++g+k+ll++ +r+k evm.model.AsparagusV1_08.404 92 NESFRRGEKRLLCRYQRRKI 111 ***************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 137 aa Download sequence
MAPAVEQXXX XXXRSLPTPF LSKTYQLVDD PSVDDVISWN DDGSAFIVWK PAEFARDLLP 60 KYFKHNNFSS FVRQLNTYGF RKIVPDRWEF SNESFRRGEK RLLCRYQRRK ISTATPAAVV 120 FQPLRSIDGC GGGDTL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	6e-57	HSF family protein