PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.412
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family Dof
Protein Properties Length: 262aa    MW: 27865.2 Da    PI: 9.2266
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.412genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.39.2e-4046106262
                        zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                                   ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknkk+s
  evm.model.AsparagusV1_08.412  46 KEQALPCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKHS 106
                                   57899*****************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MDTAQWAQGL GMSTVNTTFN TTTAAAAAAA AXXXXQIGEK RARPVKEQAL PCPRCNSTNT  60
KFCYYNNYSL TQPRYFCKTC RRYWTEGGSL RNVPVGGGSR KNKKHSTSTS TSTSNPATKI  120
NHNINLQPPP LLPMSSAMMK PYDEIINGGG FSAMDLLRST GITARGLNPL VHMPMAPESG  180
AIYGSGFGLN EFKFSLDGNG NCNGMQGGGG GGRLLFPFED LKPVSIKSSN EDANDQENRI  240
QGGDPSLFWS GANLGGNGGS W*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.28e-41Dof family protein