PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.504
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GATA
Protein Properties Length: 268aa    MW: 30098 Da    PI: 10.0207
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.504genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.42e-18141174134
                          GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                                   Cs+C+ttkTplWR+gp+g+k+LCnaCG+++ k +
  evm.model.AsparagusV1_08.504 141 CSSCKTTKTPLWRSGPQGPKSLCNACGIRQMKAR 174
                                   ****************************997765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MISMEENYQN QNHFPPSTIS ADTSSFSCPF RLNPRQDQEE NHLLHHHHHQ ETNDLMSVGG  60
PSSHSALNQT TSNHNQQIED EHAQGSTKWM SSKMRLMKKM LGTDQILTNK QRRSQSLQDQ  120
TQLNQASRSS NISSNEIIRV CSSCKTTKTP LWRSGPQGPK SLCNACGIRQ MKARRAMRAA  180
AGLSNSLINT AECKIQKEEE KRSDVDRTVP FKKRFKIVTP ASSQKKIQFD DIAMSLRNKL  240
AFHQTFPQEE KDAAILLMAL SGGLIHG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.11e-27GATA family protein