PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.729
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 202aa    MW: 23154.5 Da    PI: 5.7846
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.729genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM88.71.1e-27321571128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekew.yfFskrdkkyatgkrknratks 80 
                                   lp GfrF Pt + ++ ++ ++kv g +l++ + ike+d+y +eP++Lp +++++++ w yfF+  +++     ++ r+t +
  evm.model.AsparagusV1_08.729  32 LPIGFRFCPTGDVVIRHFVRNKVLGAPLPI-NPIKEIDVYLFEPEELPITMSNGDEIWmYFFVYMAEE-----NSDRSTPK 106
                                   699***************************.88***************98889999887999887665.....57899*** PP

                           NAM  81 gyWkatgkdkevlsk.kgelvglkktLvfykg.rapkge.ktdWvmheyrl 128
                                   gyWk   +d++++++ ++e +glk+t+++y++   p+g+ kt+W+m+e+++
  evm.model.AsparagusV1_08.729 107 GYWKLDVSDEPIKDSdTKEIIGLKNTFIYYRKeLGPNGRyKTNWTMQEFQA 157
                                   *************9967778**********6535677766*********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MDSSPSALSA SSPLELTSPL PPYNEDGTHP CLPIGFRFCP TGDVVIRHFV RNKVLGAPLP  60
INPIKEIDVY LFEPEELPIT MSNGDEIWMY FFVYMAEENS DRSTPKGYWK LDVSDEPIKD  120
SDTKEIIGLK NTFIYYRKEL GPNGRYKTNW TMQEFQATNI ENLKDPKMKN WVICKIETVI  180
PQEYEVKVSK KGKMSNRVHK Q*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.16e-25NAC family protein