PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.835
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 170aa    MW: 19206.9 Da    PI: 10.0204
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.835genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM89.94.5e-2871293128
                           NAM   3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   pG++F Ptd+e+v++yL + ++g+    +  vi++v+iy++ePw+Lpk + ++ ++e+y+ ++r+    tg+r  r + +g
  evm.model.AsparagusV1_08.835   7 PGMKFVPTDKEIVDHYLVNILNGRIrPGVGGVINDVNIYSFEPWNLPKaTRYGIDSETYYITQRK---GTGRRVARRAGAG 84 
                                   9*********************9983444567***************623334566888888764...4799****99*** PP

                           NAM  82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   +Wk  g++k v+ k+g+++g  + L +   ++++ ++++Wvm+ey+l
  evm.model.AsparagusV1_08.835  85 TWKLNGSEKVVTGKGGRVMGHVNHLCYI--KDNEKVSSNWVMDEYTL 129
                                   ****************************..5556679********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MELMKYPGMK FVPTDKEIVD HYLVNILNGR IRPGVGGVIN DVNIYSFEPW NLPKATRYGI  60
DSETYYITQR KGTGRRVARR AGAGTWKLNG SEKVVTGKGG RVMGHVNHLC YIKDNEKVSS  120
NWVMDEYTLA GDHGSKFDNW AICRIKLNAR TEKRNKKQEV QEKKEEAGA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.25e-18NAC family protein