PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_09.1164
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ERF
Protein Properties Length: 228aa    MW: 25918.1 Da    PI: 10.2356
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_09.1164genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.99.3e-12104145351
                            AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                                     +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  evm.model.AsparagusV1_09.1164 104 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 145
                                    79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MVSLRRRRLL GLCSGRNSVP VQLPGSTENG SIMENSNKTV KPFSVHPLPS FILSHQKPTN  60
ISEASFASSN ASASSSSKED TGKKVKRRKR HRRKHYEDQE PCIMRGVYFK NMKWQAAIKV  120
DKKQIHLGTV GSQEEAARLY DRAAFMCGRE PNFELSEEEK RELSQYKWEE FLTLTRNAIN  180
IKKHQRRIGV RGRPRKTEVQ NSNYDPERGT GVSSMSDDDE DEETSAT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18389KKVKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.15e-47ERF family protein