PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_09.1235
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 416aa    MW: 47890.3 Da    PI: 9.2262
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_09.1235genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.45.4e-18999199
                                   EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
                             B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82
                                   ffk++    + +s+ l++p  f ++++ +  +++ + l+ +sg +W v++   k+ +++ +++GWk+Fv ++ L  gD ++F
  evm.model.AsparagusV1_09.1235  9 FFKIF--LPNQSSNSLRIPPAFGDHIEVE--SNRRVYLKGQSGSVWGVNM--VKNCDGFSFEDGWKDFVVDHSLIMGDLLIF 84
                                   88999..66777778********777644..5668***************..****************************** PP

                                   EE-SSSEE..EEEEE-S CS
                             B3 83 kldgrsefelvvkvfrk 99
                                   +++g+ +f   v vf++
  evm.model.AsparagusV1_09.1235 85 RYNGSLRF--EVLVFDS 99
                                   *9886555..8888876 PP
2B355.31.2e-17315403498
                                    E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                             B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                                    v+  s+v +s  ++lp  f+++h  k  e+  lt+ d++g++W++++i  ++ g+  l++GW +F  a++L+  D+++F+
  evm.model.AsparagusV1_09.1235 315 VMQDSYVYTSFFMCLPTWFVRKHLPK--ENAVLTVSDPNGKQWKMTYICYNSHGA--LSGGWGKFTYAHNLEKHDVCIFE 390
                                    67889******************533..4569***************87777766..9********************** PP

                                    E-SSSEE..EEEEE- CS
                             B3  84 ldgrsefelvvkvfr 98 
                                    +++++    +v+++r
  evm.model.AsparagusV1_09.1235 391 FIDTDHL--KVHIYR 403
                                    9985555..788776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    
MANSKPHYFF KIFLPNQSSN SLRIPPAFGD HIEVESNRRV YLKGQSGSVW GVNMVKNCDG  60
FSFEDGWKDF VVDHSLIMGD LLIFRYNGSL RFEVLVFDSS ACEKRKAFLA RPSMGEEIED  120
VEETEQSKQE MVKEEEEEEE EDNKPLVHFA KRKFDGNLKK RKKKQFPSYG DQSNSGQPLP  180
KSRDLATPKQ EQVSYSPPSP FKFTKDTQMQ KNGECMHGNS AFHVRRFISN KNLQLRYRSG  240
QVSRCTPHST KGSTSKKSSK SVELVKSDES ACRTGSVYRM RALISQRRPV TTEEVERALQ  300
RALKFQSEHP FAVSVMQDSY VYTSFFMCLP TWFVRKHLPK ENAVLTVSDP NGKQWKMTYI  360
CYNSHGALSG GWGKFTYAHN LEKHDVCIFE FIDTDHLKVH IYRVLEEITP LLRPR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1159163KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.16e-18B3 family protein