PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_09.1355
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 72aa    MW: 8461.47 Da    PI: 9.1855
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_09.1355genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.22.2e-063956219
                                   HHHHHHHHHHHHHHHHHH CS
                            HLH  2 rrahnerErrRRdriNsa 19
                                   r +h+++E+rRR++iN++
  evm.model.AsparagusV1_09.1355 39 RSKHSAMEQRRRSKINDR 56
                                   899*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    
MEILSRSSEE DEDEYLRRDF TVRFDGKNAE QKQQLLTPRS KHSAMEQRRR SKINDRSVIL  60
MDNAGSPFFI R*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08130.34e-10bHLH family protein