PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_09.1430

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

CPP

Protein Properties

Length: 274aa MW: 30068.3 Da PI: 8.0384

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_09.1430	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	41.8	2.2e-13	42	78	4	40
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++C+C+ks+C k+YC+Cf ++ +C+++C+C++C N+ evm.model.AsparagusV1_09.1430 42 RSCTCEKSQCWKLYCDCFTNNYYCGKSCSCDGCWNSI 78 78********************************975 PP
2	TCR	44.8	2.4e-14	108	146	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++kgCnC ks+C+kkYCeC++ag+ Cs +C+C +C+N+ evm.model.AsparagusV1_09.1430 108 QTKGCNCMKSHCQKKYCECYNAGNGCSLNCRCAGCQNSY 146 679**********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MRTTDSYAAT RGFGRLFGGF NSHEGRTGAG SRSNRDNGNA LRSCTCEKSQ CWKLYCDCFT 60 NNYYCGKSCS CDGCWNSIDK EDSVRAAREH IESRDSGGKK IASSSGMQTK GCNCMKSHCQ 120 KKYCECYNAG NGCSLNCRCA GCQNSYGKRQ GTEPVIQSVS KRGRKPKNSI DVRILIENSK 180 TIDHQPIQSS MENGQIVLNH DNQLPCIVPE TRERQTSQET MILSRVMPEA NENVSLLEAQ 240 YAAGSSSAQS ELIQGSSDHS DEYMHASKPN TPN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	7e-32	CPP family protein