PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_09.1435
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 220aa    MW: 24871.4 Da    PI: 9.926
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_09.1435genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.66.2e-50201441128
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratks 80 
                                    lppGfrFhPtdeelvv+yL++k+ + +l++  +i+e+d+ k++PwdLp    ++e+e yfF+ r+ ky++g+r+nrat  
  evm.model.AsparagusV1_09.1435  20 LPPGFRFHPTDEELVVQYLRRKAYSCPLPA-AIIPEIDLGKHDPWDLP---GGREHERYFFALREAKYPNGNRSNRATGC 95 
                                    79***************************9.88***************...4578899********************** PP

                            NAM  81 gyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    gyWkatgkdk+++++  +++ g+kktLvfy g+ap+g+ktdW+mheyrl
  evm.model.AsparagusV1_09.1435  96 GYWKATGKDKAIVASkCNQVAGMKKTLVFYCGKAPSGSKTDWIMHEYRL 144
                                    ************998678889**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MEKPSPRPGI VVHQNVMTKL PPGFRFHPTD EELVVQYLRR KAYSCPLPAA IIPEIDLGKH  60
DPWDLPGGRE HERYFFALRE AKYPNGNRSN RATGCGYWKA TGKDKAIVAS KCNQVAGMKK  120
TLVFYCGKAP SGSKTDWIMH EYRLASPPQR KKSTNSSIVL PPRDWVLCRI FMKKRATRMD  180
TDTEEGEHPV GFIDFLGQRR DDRRPSSPSN SDSSCVTYT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.19e-78NAC family protein