PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_09.1627

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 393aa MW: 44097.6 Da PI: 5.8404

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_09.1627	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	98.3	1.1e-30	57	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikev.d...iykvePwdLpkkvkaeekewyfFskrdkkyatgkrk 74 lp+G++F+Ptd el+ e+L+ k+ k + ++e+i++v d i++++P++Lp vk++ ++++fF++ +++yatg+rk evm.model.AsparagusV1_09.1627 57 LPAGVKFDPTDIELL-EHLAGKTGLAKahMFIDEFIPTVeDargICYTHPENLP-GVKKDGSSIHFFHRISNAYATGHRK 134 799**********.8899997766633333444555532445******.67788899************* PP NAM 75 nra........tksgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 +r+ ++ +W++tgk+k+v++ +g +g kk++v+y+ + k+ k++Wvmh+y+l evm.model.AsparagusV1_09.1627 135 RRKigecnstsEERVRWHKTGKTKPVME-NGVPKGWKKIMVLYRSlkKGCKPDKANWVMHQYHL 197 87888886555899**********.99********6432666778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MARTWLVNAR GIARKVKNAN RFSNYQIKEL GIEAHRECPS CNHIIDNSDV SLEWPGLPAG 60 VKFDPTDIEL LEHLAGKTGL AKAHMFIDEF IPTVEDARGI CYTHPENLPG VKKDGSSIHF 120 FHRISNAYAT GHRKRRKIGE CNSTSEERVR WHKTGKTKPV MENGVPKGWK KIMVLYRSLK 180 KGCKPDKANW VMHQYHLGID EDEKDGELVV SKIFYQQNTK LTEGDAEKVQ DSDVSVGTCP 240 TTPKTVTPEL RRAEKLSPLS ETHEYNASPL SETHEYNAQK ELHLECEVPP SVTQQMDNGV 300 NSLWLAGESQ AVEEFDPTAI DESLLCHEVL DSFGLANPDL DHGRNDMLNR NAKTAPLFSD 360 LDNIIIDTPP DFQLADLQFG SQDSISSWLD RL*

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MARTWLVNAR GIARKVKNAN RFSNYQIKEL GIEAHRECPS CNHIIDNSDV SLEWPGLPAG  60
VKFDPTDIEL LEHLAGKTGL AKAHMFIDEF IPTVEDARGI CYTHPENLPG VKKDGSSIHF  120
FHRISNAYAT GHRKRRKIGE CNSTSEERVR WHKTGKTKPV MENGVPKGWK KIMVLYRSLK  180
KGCKPDKANW VMHQYHLGID EDEKDGELVV SKIFYQQNTK LTEGDAEKVQ DSDVSVGTCP  240
TTPKTVTPEL RRAEKLSPLS ETHEYNASPL SETHEYNAQK ELHLECEVPP SVTQQMDNGV  300
NSLWLAGESQ AVEEFDPTAI DESLLCHEVL DSFGLANPDL DHGRNDMLNR NAKTAPLFSD  360
LDNIIIDTPP DFQLADLQFG SQDSISSWLD RL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	2e-93	NAC family protein