PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_09.291
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 210aa    MW: 23050.4 Da    PI: 9.4802
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_09.291genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.11.4e-1762151198
                                   EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS
                            B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81 
                                   f+k +++s+v+   +l lp kf++e+ +++e    ++lede+g++ +v +   +++++  l++G ++F+ +++L++gD++v
  evm.model.AsparagusV1_09.291  62 FIKPMVRSHVSGGFWLGLPTKFCKENFSPNEL--RVILEDEKGKEHDVLY--LGRKNG--LSGGRRGFAIDHNLEDGDVLV 136
                                   89************************877555..7***************..555555..9******************** PP

                                   EEE-SSSEE..EEEEE- CS
                            B3  82 Fkldgrsefelvvkvfr 98 
                                   F+l++ ++f  +v++++
  evm.model.AsparagusV1_09.291 137 FELSEPTRF--KVRIIK 151
                                   **9765666..888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MISLAGPNAV IGRAFVVHEL EDDLGKGELC VPKFLFSEDQ KIAALKRAEE PQRDLTSHYP  60
SFIKPMVRSH VSGGFWLGLP TKFCKENFSP NELRVILEDE KGKEHDVLYL GRKNGLSGGR  120
RGFAIDHNLE DGDVLVFELS EPTRFKVRII KAIEGESPET DKLADCAAAL SKSKGSSGTK  180
EEIQAVSKKR SLKTGSAKEA LKATKRGRR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.14e-40B3 family protein