PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_09.367

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

FAR1

Protein Properties

Length: 683aa MW: 78648.6 Da PI: 6.9584

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_09.367	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.2	8.3e-21	65	158	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwe 77 +fY+++Ak+ GFs+r+++++ + + t+r fvC + g++ + ++++k +r+r+++r+gC+a l+++k++ ++w+ evm.model.AsparagusV1_09.367 65 EFYSQFAKQSGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPIKVSNETKPQRNRKSSRCGCQAYLRISKNTdmgVSEWR 145 6************9998877356667999*************9******************99777789 PP FAR1 78 vtkleleHnHela 90 vt + ++HnH+l evm.model.AsparagusV1_09.367 146 VTGFANNHNHDLL 158 **********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence
MMLMSEETRA MLSIYDDPSE QRSLSLDETS STEESPEDTR LSLETSNDSI PYIGQRFDTH 60 DAAYEFYSQF AKQSGFSIRR HRTEGKDGVG KGLTRRYFVC HRAGNTPIKV SNETKPQRNR 120 KSSRCGCQAY LRISKNTDMG VSEWRVTGFA NNHNHDLLEP NQVRFLPAYR TISDSDKNRI 180 FMFAKTGISV QQMMRLMELE KCVEPGFLPF TEKDVRNLIQ SFRKVDQEEE SIDLLRMCKN 240 IKEKDPNFRY EFTVDASNRL ENIAWSYASS IQSYEVFGDA VVFDTTHRLN AFDMPLGIWV 300 GMNNYGMPCF FGCVLLREEN VPSFSWALKV FLSFMNEKAP QTILTDQNMC LKEAIAVEMP 360 TTKHALCIWL IVAKFPSWFN AVLGERYNEW KSEFYRLYNL EEIEDFELGW RDMVDSFGLH 420 TNRHISNLFA FRMLWALPYL RSHFFAAMTA SGLSKSINAF IQRFLSAQSR LAHFIEQVAV 480 AVDFRDQAGE QQTMQQNLQN ICLKTGAPME AHAATVLTPY AFSKLQDELV MAAHYASFQM 540 EENCFLVRHH TKIDGGRKVI WSSQDDLLSC SCQMFEFSGI LCRHSLRVLS TLNCFQIPDR 600 YLPIRWRRVN SLPSRLVQVA TVNEQAERVQ ALQSMVSCLV SEAAKSKERL DAVFEEVSAL 660 LSRVREQPVA LHGFRDGVYR NR*

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence

MMLMSEETRA MLSIYDDPSE QRSLSLDETS STEESPEDTR LSLETSNDSI PYIGQRFDTH  60
DAAYEFYSQF AKQSGFSIRR HRTEGKDGVG KGLTRRYFVC HRAGNTPIKV SNETKPQRNR  120
KSSRCGCQAY LRISKNTDMG VSEWRVTGFA NNHNHDLLEP NQVRFLPAYR TISDSDKNRI  180
FMFAKTGISV QQMMRLMELE KCVEPGFLPF TEKDVRNLIQ SFRKVDQEEE SIDLLRMCKN  240
IKEKDPNFRY EFTVDASNRL ENIAWSYASS IQSYEVFGDA VVFDTTHRLN AFDMPLGIWV  300
GMNNYGMPCF FGCVLLREEN VPSFSWALKV FLSFMNEKAP QTILTDQNMC LKEAIAVEMP  360
TTKHALCIWL IVAKFPSWFN AVLGERYNEW KSEFYRLYNL EEIEDFELGW RDMVDSFGLH  420
TNRHISNLFA FRMLWALPYL RSHFFAAMTA SGLSKSINAF IQRFLSAQSR LAHFIEQVAV  480
AVDFRDQAGE QQTMQQNLQN ICLKTGAPME AHAATVLTPY AFSKLQDELV MAAHYASFQM  540
EENCFLVRHH TKIDGGRKVI WSSQDDLLSC SCQMFEFSGI LCRHSLRVLS TLNCFQIPDR  600
YLPIRWRRVN SLPSRLVQVA TVNEQAERVQ ALQSMVSCLV SEAAKSKERL DAVFEEVSAL  660
LSRVREQPVA LHGFRDGVYR NR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein