PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_09.456

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

DBB

Protein Properties

Length: 202aa MW: 22170.3 Da PI: 4.6983

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_09.456	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.1	1.6e-07	5	45	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ ++ C ++ lCe+C +e H H++ evm.model.AsparagusV1_09.456 5 QCDACEKAPAVVICCADEAALCEKCDVEVHAAnklaskHQR 45 7*****************************65667777765 PP
2	zf-B_box	30.8	5.9e-10	54	87	2	35
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHk 35 + ++C+ ++ek + +fC +++ l+C+dC +++H evm.model.AsparagusV1_09.456 54 KLPRCDICQEKTAFIFCVEDRALFCRDCDETIHV 87 789******************************4 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MMKIQCDACE KAPAVVICCA DEAALCEKCD VEVHAANKLA SKHQRLLLDC LSNKLPRCDI 60 CQEKTAFIFC VEDRALFCRD CDETIHVAGS LSGNHQRYLA TGIRVALSSM CNKDTEKGCH 120 EPPNQNFATL ESKIPITQAS PSSFMNSAWA VDEFLQLSDY ESGDKKEPPV GFGELEWFAD 180 ISLFPEQLPK GTLAAXXXXS Q*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	6e-78	DBB family protein