PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_09.493
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GRAS
Protein Properties Length: 137aa    MW: 15180.3 Da    PI: 9.568
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_09.493genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS44.82.1e-1431124397
                          GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl 83 
                                   +lL ecA+a++++d  l+q++L+ l+elasp+gd  q+la++f++AL  + ++   ++yk+l+ + +s ++ +++ ++   
  evm.model.AsparagusV1_09.493  31 KLLGECAKAIADKDSGLIQHYLWMLNELASPYGDCDQKLASHFLQALFCKPTGFRRRCYKTLRRRGES-HSFESRWKVILK 110
                                   7899**********************************************************999887.567777788888 PP

                          GRAS  84 fsevsPilkfshlt 97 
                                   f+   P+ +f h++
  evm.model.AsparagusV1_09.493 111 FQGSEPVDNFRHVA 124
                                   **********9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MQNPNHNFYP STSHPPEISD PSASGGKWAA KLLGECAKAI ADKDSGLIQH YLWMLNELAS  60
PYGDCDQKLA SHFLQALFCK PTGFRRRCYK TLRRRGESHS FESRWKVILK FQGSEPVDNF  120
RHVASMARLG GLGVGG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.17e-29GRAS family protein