PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_09.559
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 202aa    MW: 23074.4 Da    PI: 8.617
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_09.559genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM85.51e-26361593128
                           NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekew.yfFskrdkkyatgkrknratksgy 82 
                                   pG+rFhP  + ++ ++   kv g +l++ + ike+d+y +eP +Lp +++ ++++w yfF+   +     +++ r+t +gy
  evm.model.AsparagusV1_09.559  36 PGLRFHPAGDVVIRHFVSSKVLGAPLPI-NPIKEIDVYLFEPDELPVTISDGNERWmYFFMYMTE-----ENSDRSTPKGY 110
                                   8***************************.88***************9888888999788876544.....56899****** PP

                           NAM  83 Wkatgkdkevlsk.kgelvglkktLvfykg.rapkge.ktdWvmheyrl 128
                                   Wk   +d+++++  ++e +glk+t+++y++   p+g+ kt+W+m+e+r+
  evm.model.AsparagusV1_09.559 111 WKLDVSDEPIKDPdTKEIIGLKNTFIYYSKeLGPNGRyKTNWTMQEFRA 159
                                   ************967778**********5535677766*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MDSSPAVPSS SSSPSKLPSP LPPFNEDGTH PCLPWPGLRF HPAGDVVIRH FVSSKVLGAP  60
LPINPIKEID VYLFEPDELP VTISDGNERW MYFFMYMTEE NSDRSTPKGY WKLDVSDEPI  120
KDPDTKEIIG LKNTFIYYSK ELGPNGRYKT NWTMQEFRAT NLENLKDPKM KNWVVCKIQT  180
VIPREYESKV SKRGKRKKSF T*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.13e-24NAC family protein