PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_09.570
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 210aa    MW: 24105.2 Da    PI: 8.5076
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_09.570genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.17.4e-09126168754
                                   HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                           HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                   ++ r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  evm.model.AsparagusV1_09.570 126 IAARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 168
                                   56799*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MDITKTNTNS TTPTTSSSSS WDLDMTMNNH ILLDQIQPPY DLTLNPSLHH HFQNLIPPNP  60
QFQLELSESD NNAQSHNDNE EEEEALGAMK EMMYKIAAMQ PVDIDPSTIK KPKRRNVRIS  120
DDPQSIAARH RRERISERIR ILQRLVPGGT KMDTASMLDE AIRYVKFLKR QVQELQANRW  180
GPKSESRSGL WVGVWAHRHR QGWVVCRQG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09750.12e-40bHLH family protein