PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_09.607
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 223aa    MW: 24974.6 Da    PI: 6.8902
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_09.607genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.6e-124995455
                                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                                   h  +Er+RR++i + +++L  ++P +     kK +K +iL ++++Y+k+++
  evm.model.AsparagusV1_09.607 49 DHILAERKRRENISEQLFTLSMIIPGL-----KKRDKLSILMHTIDYLKQME 95
                                  6899**********************9.....8****************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MLNPPSSSPL PLSKSQQLIC FQTHPSDVEE PEKFADTSKR SRSIDLNQDH ILAERKRREN  60
ISEQLFTLSM IIPGLKKRDK LSILMHTIDY LKQMEEKVKT LEEQASKETV EPSVSTTKSQ  120
LSVASDEGEE SVPSAHSTLP EIEAKISATA VFIRIHCKNR RGVTLKVLGE IEKLHLSVIN  180
SSSLPFSDHF LDINVTAQVE EGFAMTVKDL LKKLNSAFRN FM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15459ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.12e-39bHLH family protein