PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_09.96
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 202aa    MW: 22384.5 Da    PI: 6.8916
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_09.96genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.64.8e-232797167
                                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHH CS
                           B3  1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWke 67
                                 f+k ltpsdv+k++rlv+pk++ae+h      +   e++  l++edesg+sW+++++y+ +s++yvltkGW++
  evm.model.AsparagusV1_09.96 27 FEKPLTPSDVGKLNRLVIPKQHAEKHfpldseS--GEKGLLLSFEDESGKSWNFRYSYWTSSQSYVLTKGWSR 97
                                 99**************************99543..457789******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MGSNHNHHYF QFEQEQDRGV YRKEHMFEKP LTPSDVGKLN RLVIPKQHAE KHFPLDSESG  60
EKGLLLSFED ESGKSWNFRY SYWTSSQSYV LTKGWSRRRV SNETAAPSAS VSARSPSFYA  120
AGASTPYAAP YYYMSPVNSG DQAAASSMDN TVAVATTGNS RRLRLFGVNL ECGPDPEEPD  180
QHSASGAWNQ FMPTNASTSQ L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11580.11e-42B3 family protein