PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.1176
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 75aa    MW: 8282.43 Da    PI: 8.5248
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.1176genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.32.4e-071391654
                                   HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                            HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                                   +N+ +++L++llP++ + +s++      L+++++YIk L
  evm.model.AsparagusV1_10.1176  1 MNELISKLQSLLPESHRRGSGRAPATKLLKETCNYIKAL 39
                                   8*************889********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    
MNELISKLQS LLPESHRRGS GRAPATKLLK ETCNYIKALH REVDDLSDRL SDLMSTMDNG  60
SAQAEIVRSL LRSN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.14e-18bHLH family protein