PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.1585
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ERF
Protein Properties Length: 214aa    MW: 23746.6 Da    PI: 5.0471
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.1585genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.6e-1878129256
                            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                    +y+GVr+++ +g+++AeIrd +    +  r++lg+f +ae Aa a+++a+ +++ge
  evm.model.AsparagusV1_10.1585  78 CYRGVRRRP-WGKYAAEIRDSTR---HgVRVWLGTFESAEAAALAYDQAAYAMRGE 129
                                    8********.**********422...25**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MDSSPQFLSQ IHDLSSESSL GSWESLPFNM NDSEDMLLFD ILAQVSNAET SSNETNTCNS  60
AAPNEEEVQS KNQPKGKCYR GVRRRPWGKY AAEIRDSTRH GVRVWLGTFE SAEAAALAYD  120
QAAYAMRGEN AVLNFPVETV RESMRGVRVE SVEEGGSPVV ALKRRHSIRM KAMGVRKGKE  180
TKKKVESVVE LEDLGAEYLE ELLRTSTEIV GPW*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.17e-32ERF family protein