PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.1646
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HSF
Protein Properties Length: 171aa    MW: 20133.8 Da    PI: 9.4094
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.1646genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind106.61.9e-33131042101
                                    HHHHHHHHHC.TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEE CS
                   HSF_DNA-bind   2 Flkklyeile.deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiwe 80 
                                    Fl+k+y+++e +++ ++++sw+e+g+ fvv+ +eef++ vLp+yFkh nf+SF+RQLn+YgFkk + ++         we
  evm.model.AsparagusV1_10.1646  13 FLSKTYDLVEeSRDSNDVVSWNEEGSGFVVWSPEEFSRFVLPRYFKHCNFSSFIRQLNTYGFKKASPDR---------WE 83 
                                    9********94558899*************************************************999.........** PP

                                    EEESXXXXXXXXXXXXXXXXX CS
                   HSF_DNA-bind  81 FkhksFkkgkkellekikrkk 101
                                    F+h++F+kgk+ ll++i r++
  evm.model.AsparagusV1_10.1646  84 FRHEKFQKGKRCLLSDITRRR 104
                                    *******************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MTSLSKLRSL APFLSKTYDL VEESRDSNDV VSWNEEGSGF VVWSPEEFSR FVLPRYFKHC  60
NFSSFIRQLN TYGFKKASPD RWEFRHEKFQ KGKRCLLSDI TRRRCKPSVF PSFLRAREKK  120
SSAAEINENE MLEQNKMLQK ENEELRSQIA YYGELETSLQ KLLSQYVCSR *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.18e-41HSF family protein