PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.1691
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 79aa    MW: 9205.25 Da    PI: 9.1849
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.1691genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.86.2e-064663219
                                   HHHHHHHHHHHHHHHHHH CS
                            HLH  2 rrahnerErrRRdriNsa 19
                                   r +h+ +E+rRR++iN++
  evm.model.AsparagusV1_10.1691 46 RSKHSTMEQRRRSKINDR 63
                                   899*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    
MEILSRSSEE DEDEYLRREG SSQRGDFIVR FDGKNAEQKQ QLLTPRSKHS TMEQRRRSKI  60
NDRSVILMDN AGSPFFIR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08130.11e-09bHLH family protein