PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.1850
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 141aa    MW: 16119.8 Da    PI: 6.7144
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.1850genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.000142547123
                                   EEETTTTEEESSHHHHHHHHHHT CS
                        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                                   y C +C++sF+++  L  H ++H
  evm.model.AsparagusV1_10.1850 25 YNCIYCDRSFNSSQALAGHCKSH 47
                                   6788*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MSDQAKTNQP PEQVAENEVA VHEIYNCIYC DRSFNSSQAL AGHCKSHRND IFKSLQKPAP  60
EKGQEPIFKY QMLSGPNVQY PQYYQHYAYH ALSQSSTFYE PYTHSIRVTT RPIADHFYDH  120
GSSSNGKENS KEELDLTLRL *