PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_10.199

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

C2H2

Protein Properties

Length: 187aa MW: 20082 Da PI: 4.7908

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_10.199	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.1	0.00014	9	31	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+ksF ++ L H +H evm.model.AsparagusV1_10.199 9 YVCGTCKKSFASHQALGGHAASH 31 9************9999888877 PP
2	zf-C2H2	13.7	0.00018	62	84	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C +sF + L H+r+H evm.model.AsparagusV1_10.199 62 HVCETCLMSFATGQALGGHMRKH 84 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MKLDGSRAYV CGTCKKSFAS HQALGGHAAS HNKEKNKKGE EDGNGPNKDR KKSGDGDHEK 60 EHVCETCLMS FATGQALGGH MRKHFDPTKL KKPKREAEQV GGMSEDTGGN LDELPLTNSM 120 EEADRVQTVT EENGGAFGDF QNVNGEETDD NSGESRPAGN LTGLPHVFDL NELALMCDEE 180 MQDSGI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43170.1	8e-16	C2H2 family protein